BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C07SP1|AL427459
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1148 1294 0.0
>3x_Contig1148
Length = 4745
Score = 1294 bits (648), Expect = 0.0
Identities = 682/694 (98%), Gaps = 3/694 (0%)
Strand = Plus / Minus
Query: 244 catactcctactataaagtaaatttagaccctatctattacaaattcacacacatagtac 303
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4744 catactcctactataaagtaaatttagaccctatctattacaaaatcacacacatagtac 4685
Query: 304 tccgtttcttccagtcaccggtgtctctctgtctatttctctgtgcatatggactgcgat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 tccgtttcttccagtcaccggtgtctctctgtctatttctctgtgcatatggactgcgat 4625
Query: 364 gcgcctattttctcctattatmaacgatgaacaatttttggaaaaatatgamaagttgga 423
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 4624 gcgcctattttctcctattataaacgatgaacaatttttggaaaaatatgaaaagttgga 4565
Query: 424 aattaatgacaattagtactttcttcattcattgcatcagttccatgcmagattgtmcta 483
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 4564 aattaatgacaattagtactttcttcattcattgcatcagttccatgcaagattgtacta 4505
Query: 484 ttgcagcagttggcttatgtgagtsaactaagcagcgactgamttagcgacaatgggtat 543
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 4504 ttgcagcagttggcttatgtgagttaactaagcagcgactgaattagcgacaatgggtat 4445
Query: 544 caacaatcctattcctagatctcttaaatctgagacgaagtatgtgtgaccttttttttt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 caacaatcctattcctagatctcttaaatctgagacgaagtatgtgtgaccttttttttt 4385
Query: 604 ttttggttgatttagtttcccttcaagttgtggcaggttgcaaagggatcggtttacttg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 ttttggttgatttagtttcccttcaagttgtggcaggttgcaaagggatcggtttacttg 4325
Query: 664 atatgctgatgatacaccgtatcgttccaagccttcggcttggaactctgtggtgtatta 723
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4324 atatgctgatgatacaccgtatcgttccaagccttcggctt-gaactctgtggtgtatta 4266
Query: 724 tattatattcatctcagttgggaaactgagatgaataatgagagt-aacmctttgaattc 782
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 4265 tattatattcatctcagttgggaaactgagatgaataatgagagtaaacactttgaattc 4206
Query: 783 cttgcycccgagatgattcactgttgaaagattcaaccatagtctcccagtacaatttac 842
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4205 cttgctcccgagatgattcactgttgaaagattcaaccatagtctcccagtacaatttac 4146
Query: 843 taactgctttgagtattcactgttccactttgttatttttcaataatgagccaggggttt 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4145 taactgctttgagtattcactgttccactttgttatttttcaataatgagccaggggttt 4086
Query: 903 gtcctttgggttaaga-cccaggatcattgagaa 935
|||||||||||||||| |||||||||||||||||
Sbjct: 4085 gtcctttgggttaagaccccaggatcattgagaa 4052
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,230
Number of Sequences: 1807
Number of extensions: 13230
Number of successful extensions: 192
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)